PATHOLOGY WORKBENCH

Our Pathology Workbench is an end-to-end solution that integrates directly with lab sequencers, annotates detected variants, brings back potential clinical trials and therapies, and produces a comprehensive summary report. We help pathology labs validate their new assays, and scale their test volume through easy variant analysis and comprehensive support for large panels, such as TSO 500. Our solution is also a process enhancement tool that enables users to go from order entry to quality control to variant analysis and reporting, quickly and easily.

We help you easily analyze and interpret raw genomic data.

OUR SOLUTION

GenomOncology's Pathology Workbench enables molecular pathology labs to easily process, validate, and report their genomic testing results into actionable information for clinicians.

WHAT WE ENABLE YOU TO DO

Easy Integration

Our tool has the flexibility to integrate with your current technology infrastructure, including NGS sequencers, laboratory information management systems (LIMS), EHRs, etc.

Multiple Test Modes

Our tool supports the analysis of any type of alteration including SNV, CNV, Fusions, Structural Variants, Expression, TMB, MSI, and Karyotype, and results can be incorporated from FISH, IHC, PCR, etc, in addition to NGS.

 

 

Therapy & Clinical Trial Matching

Our Pathology Workbench enables you to obtain best-in-class therapy and clinical trial recommendations based on approval, guideline, evidence, and eligibility criteria factors. 

 

Variant Interpretation

Our Pathology Workbench includes more than 15 variant annotations, from ClinVar to COSMIC to functional prediction algorithms, ensuring all information is available for variant interpretation in one tool.

Variant Classification

Our tool auto-classifies variants based on both the ACMG classification system (pathogenic, likely pathogenic, etc.) and the somatic tiering system from AMP/ASCO/CAP to simplify reporting and prioritization.

Trust but Verify

Our software verifies your BAM files for hotspot regions that may have been missed by a variant caller to provide a second check so that you see a complete list of results within the tool.

OUR PROCESS

The Pathology Workbench provides you with recommendations to pass or fail a run based on sample level QC metrics defined by your assay validation metrics. This information can be tracked to help comply with CAP guidelines and can be exported for audit purposes.

The Pathology Workbench presents you with the information required to review variants (read counts, quality info, BAM cartoon, pile-ups, platform recommendation, etc.) while providing relevant clinical interpretations. All information is presented in a single view for a comprehensive and streamlined analysis. 

The Pathology Workbench enables flexible template-driven reporting for a variety of different use cases. The final report is fully customizable both in presentation and format. These report can be easily integrated into any EMR/LIS tool for full traceability.

OUR WORKBENCH IN USE

UNIVERSITY OF

NEBRASKA MEDICINE

In 2015, the Fred & Pamela Buffet Cancer Center at UNMC launched GenomOncology’s Pathology Workbench to streamline its reporting workflow providing easy-to-interpret genomic results to clinicians.

PERSONALIS

The Pathology Workbench has been integrated with the Personalis ACE Platform, reducing delivery time for clinical reports by several days, and returning potentially actionable results to physicians faster.

EMORY HEALTHCARE

Emory is using our Pathology Workbench to enable precision oncology by connecting disparate tools and databases and allowing data to flow end to end to aid case workflow and create actionable reports.

Office

1138 West 9th St Suite 400

Cleveland, OH 44113, USA

(440) 617-6087

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