GenomOncology's Annotations API is a flexible, comprehensive, and scalable tool that streamlines the bioinformatics pipeline, including the overall variant review and analysis process. This high-performance annotations Rest API supports up to 200 exomes per day for an institution, and integrates with GenomOncology’s Precision Oncology Platform to support annotations, filtering, and loading with minimal effort.
We maintain your variant annotation datasets to streamline your bioinformatics pipeline.
WHAT THE ANNOTATION API FEATURES
Accurate & Up-to-Date Variant Data
We provide quarterly releases that include the latest data source updates to ensure your lab has access to the most updated information available in our annotation set.
Our solution has proven effective in high-performance environments, and has the ability to scale to meet the needs of labs performing Whole Exome Sequencing (WES) and Whole Genome Sequencing (WGS) analysis.
All software and data releases go through our rigorous Quality Assurance (QA) process that includes both automated and manual testing in order to ensure minimum downstream impact to our clients and their data processing pipelines.
Our Annotation Data Set includes ten open-source and licensed data sets, with the option to scale with other licensed materials or data sets proprietary to your institution.
The Annotation API is REST-based and can be accessed in several easy-to-use formats, including any available HTTP and JSON libraries for a modern programming language, OpenAPI Specification User Interface, GO Python SDK, and a command line interface.
Our solution streamlines variant review and supports the analysis of up to about 10,000 variants per minute, 1 whole exome in about 9 minutes, and about 200 exomes per day.
OUR ANNOTATIONS API IN USE
Baylor Genetics implemented our Annotations API to expedite Whole Exome Sequencing and Whole Genome Sequencing. Baylor Genetics uses the API as a key component of their infrastructure that supports their large overall testing suite.
ARUP Laboratories utilizes our tool to expedite cancer and germline testing and review. With the Annotations API, ARUP Laboratories has increased the number of cases reviewed daily due to the accurate data available in the Annotations API.
NATIONAL GENETIC TESTING LAB
This national lab utilizes our Annotations API to streamline genetic data review by providing accurate and relevant curated datasets that allow the lab to improve their overall variant review, analysis, and treatment matching.